Peptide Database

Peptide NameCyclotide vitri peptide 52

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC161H232N36O44S7

DescriptionStandard

        GLIPCGESCAWFPFCFTETIGCSCQNKICYFM
    

Molecular Weight3600.23 Da

Isoelectric Point (pI)4.53

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0405

GRAVY Index0.62

Hydrophobic Moment 0.34

Boman Index0.33

Instability Index50.92

Aliphatic Index 51.88

Aromaticity 0.1875

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1251.58

LogP -9.74

H-bond Donors 48.0

H-bond Acceptors 50.0

Rotatable Bonds 109.0

Heavy Atoms 248.0

Ring Count 9.0

Amide Bonds 33.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0132656 VERIFIED: NO

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

RECORD: Rec_0363335 VERIFIED: YES

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Tax ID214053

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidemultiple disulfide bonds reported, sites not specified

Bio-Activity Profile

Function

Antimicrobial