Peptide Database

Peptide NamePeptide chain B in PDB 1SSB

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC59H83N13O17

DescriptionStandard

        PYVPVHYDASV
    

Molecular Weight1246.37 Da

Isoelectric Point (pI)5.08

Net Charge (pH 7.0)-0.96

Net Charge (pH 7.4) -1.07

Charge Density (pH 7.0) -0.0868

GRAVY Index0.10

Hydrophobic Moment 0.03

Boman Index0.29

Instability Index105.58

Aliphatic Index 88.18

Aromaticity 0.1818

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 458.21

LogP -2.51

H-bond Donors 16.0

H-bond Acceptors 17.0

Rotatable Bonds 32.0

Heavy Atoms 89.0

Ring Count 5.0

Amide Bonds 10.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0373533 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1SSB receptor chain A

MethodProtein-peptide complex structure