Peptide Database

Peptide NameRanacyclin E

Function Ontology

—

Standard StatusStandard

Sequence Length16 amino acids

Chemical FormulaC78H118N20O20S2

DescriptionStandard

        GAPKGCWTKSYPPKPC
    

Molecular Weight1720.02 Da

Isoelectric Point (pI)9.31

Net Charge (pH 7.0)2.74

Net Charge (pH 7.4) 2.50

Charge Density (pH 7.0) 0.1710

GRAVY Index-0.99

Hydrophobic Moment 0.12

Boman Index-0.06

Instability Index26.53

Aliphatic Index 6.25

Aromaticity 0.1250

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7115.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 619.20

LogP -5.73

H-bond Donors 22.0

H-bond Acceptors 25.0

Rotatable Bonds 47.0

Heavy Atoms 120.0

Ring Count 7.0

Amide Bonds 15.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0084784 VERIFIED: YES

Provenance & Taxonomy

OrganismPelophylax nigromaculatus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)