Peptide Database

Peptide NameS-type Pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length794 amino acids

Chemical FormulaC3847H6002N1050O1214S19

DescriptionStandard

        RGMSFSRFMDKLKSGELALLTDTPSKPVMLRDGMSKSWSLSAEGQEALSPEAKNAFLSRAKMSGGVAGGSAPSRSSAGYASNIDETYVPEPVKPDTSDAPPKLKYEYCFEVACSDETLRKSVGCAFQLGKTKQEAMIGRWQTDLTENGTKYIAHTAFDEPKKLFAKVADSLMGISVPESVQVKPIGSGIVREAFIPVIPSVQLGERLGLPTEGYYYHFHNDRLVQEYRLLGEGKWAFYATCSTHERLNDEQGYNVYQSAILVYWKLEGKEIENQHLIYLEKQITREELDNLNEGWLAQHGIKLDINELLAAPKQPVAERQTTQPAETEKAESKPETHTVGADSKTNQRESWGAIAGQYGLSAKQLLGLNPQYNADPMTLKVGDSLVVQRAEQGQNSPEKETSLPPLSPCTYSCVANTHYAYSESLLAGTPFKAINSENLFAKELPVTNLTTITTDSKATDFGRAALLAIPAHTATTNLGILSSSTPNTIGTWSISGEALAGFARMGGFLVAALWPSQLGDGTLEGNPNVSTSDTTAMRVRFNMYTDENGKQQVVGIKTGEGSAYGDRVAKREALQQGQNFVAELDSGITITWTPDGSTDVLTPDTVLPENDQLDVHNIWVRPIEEHQQEIGTALYPEEDLAEYIVTFPADAGIPPLYLVFRKTARDESGVVTGNGEDITGIWLEKAGEGLGAPIPSQVADKLRGKEFSSFDAFREAFWSAVAEDSSLLSQFSRSNQRLINRGCAPFTFPEEQVGGRQRYEVHHKEEIQHGGKVYDVENLCVVTPKRHIDIHRGS
    

Molecular Weight86994.35 Da

Isoelectric Point (pI)5.14

Net Charge (pH 7.0)-26.76

Net Charge (pH 7.4) -28.13

Charge Density (pH 7.0) -0.0337

GRAVY Index-0.44

Hydrophobic Moment 0.77

Boman Index0.00

Instability Index38.39

Aliphatic Index 76.94

Aromaticity 0.0806

Extinction Coeff. Reduced 104740.00

Extinction Coeff. Oxidized 105240.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0116610 VERIFIED: NO

Provenance & Taxonomy

OrganismVibrio bivalvicida [Bacterium]

FamilyColicin/Pyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal