Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC159H244N48O58S8

DescriptionStandard

        QQCGIQAGGALCDNGLCCSQFGYCGTTTAYCGPGCQSQCN
    

Molecular Weight4012.44 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.32

Net Charge (pH 7.4) -1.64

Charge Density (pH 7.0) -0.0330

GRAVY Index-0.06

Hydrophobic Moment 0.32

Boman Index0.13

Instability Index23.29

Aliphatic Index 36.75

Aromaticity 0.0750

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1713.06

LogP -28.42

H-bond Donors 64.0

H-bond Acceptors 65.0

Rotatable Bonds 127.0

Heavy Atoms 273.0

Ring Count 4.0

Amide Bonds 47.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0242989 VERIFIED: YES

Provenance & Taxonomy

OrganismSolanum lycopersicum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)