Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC156H235N47O56S9

DescriptionStandard

        EQCGSQAGGALCPNCLCCSKWGWCGSTSDYCGAGCQSQC
    

Molecular Weight3953.40 Da

Isoelectric Point (pI)4.37

Net Charge (pH 7.0)-1.25

Net Charge (pH 7.4) -1.56

Charge Density (pH 7.0) -0.0321

GRAVY Index-0.13

Hydrophobic Moment 0.30

Boman Index0.09

Instability Index38.48

Aliphatic Index 27.69

Aromaticity 0.0769

Extinction Coeff. Reduced 12490.00

Extinction Coeff. Oxidized 12990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1649.59

LogP -26.59

H-bond Donors 65.0

H-bond Acceptors 64.0

Rotatable Bonds 124.0

Heavy Atoms 268.0

Ring Count 6.0

Amide Bonds 43.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0230085 VERIFIED: YES

Provenance & Taxonomy

OrganismOryza brachyantha [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)