Peptide Database

Peptide NamePeptide chain A in PDB 5JYN

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC224H355N57O50

DescriptionStandard

        NWLWYIRIFIIIVGSLIGLRIVFAVLSLVNRVRQGYSPLS
    

Molecular Weight4646.57 Da

Isoelectric Point (pI)11.55

Net Charge (pH 7.0)3.76

Net Charge (pH 7.4) 3.55

Charge Density (pH 7.0) 0.0940

GRAVY Index1.09

Hydrophobic Moment 0.53

Boman Index0.37

Instability Index28.29

Aliphatic Index 165.50

Aromaticity 0.1500

Extinction Coeff. Reduced 13980.00

Extinction Coeff. Oxidized 13980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1719.26

LogP -6.53

H-bond Donors 63.0

H-bond Acceptors 54.0

Rotatable Bonds 148.0

Heavy Atoms 331.0

Ring Count 9.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0245890 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5JYN receptor chain B

MethodProtein-peptide complex structure