Peptide Database

Peptide NameCyclotide mden-I

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length30 amino acids

Chemical FormulaC134H219N37O41S6

DescriptionStandard

        GIPCGESCVYIPCITTAIGCSCKNKVCYRN
    

Molecular Weight3196.79 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0566

GRAVY Index0.35

Hydrophobic Moment 0.35

Boman Index0.13

Instability Index24.04

Aliphatic Index 74.67

Aromaticity 0.0667

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1248.44

LogP -14.76

H-bond Donors 49.0

H-bond Acceptors 49.0

Rotatable Bonds 100.0

Heavy Atoms 218.0

Ring Count 4.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0338282 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial