Peptide Database

Peptide NameSD2

Function Ontology

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Standard StatusStandard

Sequence Length35 amino acids

Chemical FormulaC155H252N52O50S4

DescriptionStandard

        AGPVTVEARTCESKSHKFRGLCVSTHNCANVCHTQ
    

Molecular Weight3772.24 Da

Isoelectric Point (pI)8.55

Net Charge (pH 7.0)2.02

Net Charge (pH 7.4) 1.62

Charge Density (pH 7.0) 0.0578

GRAVY Index-0.36

Hydrophobic Moment 0.42

Boman Index-0.09

Instability Index31.43

Aliphatic Index 52.86

Aromaticity 0.0286

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1651.29

LogP -23.73

H-bond Donors 62.0

H-bond Acceptors 59.0

Rotatable Bonds 122.0

Heavy Atoms 261.0

Ring Count 5.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0361468 VERIFIED: YES

Provenance & Taxonomy

OrganismBrassica rapa [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)