Peptide Database

Peptide NameApo5 APOC1

Function Ontology

—

Standard StatusStandard

Sequence Length22 amino acids

Chemical FormulaC121H196N32O34S

DescriptionStandard

        KTRSWFSETLNKMKEKLKTTFA
    

Molecular Weight2675.11 Da

Isoelectric Point (pI)10.17

Net Charge (pH 7.0)3.76

Net Charge (pH 7.4) 3.55

Charge Density (pH 7.0) 0.1709

GRAVY Index-1.04

Hydrophobic Moment 0.49

Boman Index-0.29

Instability Index61.75

Aliphatic Index 40.00

Aromaticity 0.1364

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1121.28

LogP -10.33

H-bond Donors 41.0

H-bond Acceptors 39.0

Rotatable Bonds 94.0

Heavy Atoms 188.0

Ring Count 4.0

Amide Bonds 22.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0051681 VERIFIED: YES

Provenance & Taxonomy

OrganismRattus norvegicus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)