Peptide Database

Peptide NamePeptide chain F in PDB 5IQM

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length13 amino acids

Chemical FormulaC66H114N26O19

DescriptionStandard

        ADSRIRIRGYVRN
    

Molecular Weight1575.77 Da

Isoelectric Point (pI)11.54

Net Charge (pH 7.0)2.80

Net Charge (pH 7.4) 2.61

Charge Density (pH 7.0) 0.2151

GRAVY Index-0.96

Hydrophobic Moment 0.32

Boman Index-0.52

Instability Index28.76

Aliphatic Index 90.00

Aromaticity 0.0769

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 780.97

LogP -9.04

H-bond Donors 30.0

H-bond Acceptors 22.0

Rotatable Bonds 53.0

Heavy Atoms 111.0

Ring Count 1.0

Amide Bonds 13.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0025384 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5IQM receptor chain G

MethodProtein-peptide complex structure