Peptide Database

Peptide NameSo-D1

Function Ontology

—

Standard StatusStandard

Sequence Length19 amino acids

Chemical FormulaC80H129N27O30S3

DescriptionStandard

        TCESQSHRFKGTCVSASNC
    

Molecular Weight2045.24 Da

Isoelectric Point (pI)7.68

Net Charge (pH 7.0)0.46

Net Charge (pH 7.4) 0.17

Charge Density (pH 7.0) 0.0241

GRAVY Index-0.57

Hydrophobic Moment 0.25

Boman Index-0.18

Instability Index30.54

Aliphatic Index 20.53

Aromaticity 0.0526

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 948.58

LogP -16.44

H-bond Donors 37.0

H-bond Acceptors 35.0

Rotatable Bonds 67.0

Heavy Atoms 140.0

Ring Count 2.0

Amide Bonds 20.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0168944 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)