Peptide Database

Peptide NamePeptide chain A in PDB 2V17

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC24H36N8O12

DescriptionStandard

        TDHGAE
    

Molecular Weight628.59 Da

Isoelectric Point (pI)4.71

Net Charge (pH 7.0)-2.51

Net Charge (pH 7.4) -2.75

Charge Density (pH 7.0) -0.4176

GRAVY Index-1.58

Hydrophobic Moment 0.36

Boman Index-0.17

Instability Index-23.10

Aliphatic Index 16.67

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 332.33

LogP -4.84

H-bond Donors 11.0

H-bond Acceptors 11.0

Rotatable Bonds 19.0

Heavy Atoms 44.0

Ring Count 1.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0216914 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 2V17 receptor chain L

MethodProtein-peptide complex structure