Peptide Database

Peptide NameCyclotide pali-A

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC134H217N37O41S6

DescriptionStandard

        GSIPCGESCVFIPCISGLAGCSCKNRVCYLN
    

Molecular Weight3194.77 Da

Isoelectric Point (pI)7.77

Net Charge (pH 7.0)0.70

Net Charge (pH 7.4) 0.41

Charge Density (pH 7.0) 0.0226

GRAVY Index0.67

Hydrophobic Moment 0.27

Boman Index0.24

Instability Index25.34

Aliphatic Index 84.84

Aromaticity 0.0645

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1231.29

LogP -15.21

H-bond Donors 48.0

H-bond Acceptors 48.0

Rotatable Bonds 100.0

Heavy Atoms 218.0

Ring Count 4.0

Amide Bonds 32.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0294325 VERIFIED: NO

Provenance & Taxonomy

OrganismPalicourea guianensis [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial