Peptide Database

Peptide NameCt-AMP1

Function Ontology

—

Standard StatusStandard

Sequence Length35 amino acids

Chemical FormulaC161H252N60O50S5

DescriptionStandard

        LCQRQSKTWSGLCTNSGHCNRQCRNWEKASHGACH
    

Molecular Weight3988.42 Da

Isoelectric Point (pI)9.10

Net Charge (pH 7.0)3.97

Net Charge (pH 7.4) 3.54

Charge Density (pH 7.0) 0.1135

GRAVY Index-1.12

Hydrophobic Moment 0.67

Boman Index-0.30

Instability Index46.73

Aliphatic Index 28.00

Aromaticity 0.0571

Extinction Coeff. Reduced 11000.00

Extinction Coeff. Oxidized 11250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1825.30

LogP -27.03

H-bond Donors 70.0

H-bond Acceptors 62.0

Rotatable Bonds 132.0

Heavy Atoms 276.0

Ring Count 7.0

Amide Bonds 40.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0362519 VERIFIED: YES

Provenance & Taxonomy

OrganismMorus notabilis [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)