Peptide Database

Peptide NamePeptide chain C in PDB 5GIM

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC28H50N8O9

DescriptionStandard

        QTAVPK
    

Molecular Weight642.74 Da

Isoelectric Point (pI)8.75

Net Charge (pH 7.0)0.76

Net Charge (pH 7.4) 0.55

Charge Density (pH 7.0) 0.1265

GRAVY Index-0.62

Hydrophobic Moment 0.35

Boman Index-0.10

Instability Index40.43

Aliphatic Index 65.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 289.37

LogP -3.22

H-bond Donors 9.0

H-bond Acceptors 10.0

Rotatable Bonds 19.0

Heavy Atoms 45.0

Ring Count 1.0

Amide Bonds 6.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0371276 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5GIM receptor chain B

MethodProtein-peptide complex structure