Peptide Database

Peptide NameGm anionic pept 1

Function Ontology

—

Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC210H316N50O64

DescriptionStandard

        DEPLWLYQGDDVIKAPSTGEHPYLPPYIDDIKLDPNIRVA
    

Molecular Weight4565.05 Da

Isoelectric Point (pI)4.19

Net Charge (pH 7.0)-5.15

Net Charge (pH 7.4) -5.41

Charge Density (pH 7.0) -0.1286

GRAVY Index-0.55

Hydrophobic Moment 0.46

Boman Index0.04

Instability Index40.84

Aliphatic Index 97.50

Aromaticity 0.1000

Extinction Coeff. Reduced 9970.00

Extinction Coeff. Oxidized 9970.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1789.62

LogP -11.53

H-bond Donors 57.0

H-bond Acceptors 60.0

Rotatable Bonds 138.0

Heavy Atoms 324.0

Ring Count 12.0

Amide Bonds 41.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0381773 VERIFIED: YES

Provenance & Taxonomy

OrganismPapilio xuthus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)