Peptide Database

Peptide NamePeptide chain O in PDB 3VQM

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC28H52N6O8

DescriptionStandard

        VIKIE
    

Molecular Weight600.75 Da

Isoelectric Point (pI)6.19

Net Charge (pH 7.0)-0.26

Net Charge (pH 7.4) -0.48

Charge Density (pH 7.0) -0.0518

GRAVY Index1.16

Hydrophobic Moment 0.48

Boman Index0.32

Instability Index61.92

Aliphatic Index 214.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 243.04

LogP 0.08

H-bond Donors 8.0

H-bond Acceptors 8.0

Rotatable Bonds 21.0

Heavy Atoms 42.0

Ring Count 0.0

Amide Bonds 4.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0376179 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3VQM receptor chain A

MethodProtein-peptide complex structure