Peptide Database

Peptide NameSD2

Function Ontology

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Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC147H236N50O52S4

DescriptionStandard

        GPVTVEARTCESQSHRFKGKCLSDGNCGNVCHNE
    

Molecular Weight3664.01 Da

Isoelectric Point (pI)6.90

Net Charge (pH 7.0)-0.09

Net Charge (pH 7.4) -0.47

Charge Density (pH 7.0) -0.0027

GRAVY Index-0.80

Hydrophobic Moment 0.50

Boman Index-0.19

Instability Index44.09

Aliphatic Index 40.00

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1670.74

LogP -25.16

H-bond Donors 61.0

H-bond Acceptors 58.0

Rotatable Bonds 122.0

Heavy Atoms 253.0

Ring Count 4.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0314606 VERIFIED: YES

Provenance & Taxonomy

OrganismEutrema parvulum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)