Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length377 amino acids

Chemical FormulaC1838H2846N520O542S13

DescriptionStandard

        MRKDDPEDPFERYLRNRRLPNGGASWAAWNTPKKPEPVYIQEDKWPAPKPRTDLVFAKSCAPGNWCSTDAGTSVEPASNFGKVMLAGAMLLPDASAAAALALGADLGLGYMAGSGIMQQRHSWAIRGLGGPASILILGMLPEKMGDGTLYTDEQLRSLTHAPTRVRFQFRQDPDGVLQVYGIHSKPSGDDSVRTVQATWNANKTAMEAKLNGITIIWTPRDGRLGPMPPLIYPDNSGAHLNNILVHPIPEDTDSQIEGFPGEDITVEDCIVVFPAGVGWKSMYVVFARPFGGDHGYHPAPKGLTAFPDALPVKKKSSVQGGGKKRNRWKDRKGRIFEWDYENGRVELYDSQGKHLGEFDPNTGERTKDAEPGRTTPK
    

Molecular Weight41316.26 Da

Isoelectric Point (pI)7.72

Net Charge (pH 7.0)1.22

Net Charge (pH 7.4) 0.45

Charge Density (pH 7.0) 0.0032

GRAVY Index-0.57

Hydrophobic Moment 0.72

Boman Index-0.03

Instability Index39.46

Aliphatic Index 67.59

Aromaticity 0.0849

Extinction Coeff. Reduced 69900.00

Extinction Coeff. Oxidized 70025.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0365774 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas syringae [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal

MethodQualitative functional evidence