Peptide Database

Peptide NamePeptide chain E in PDB 5JHQ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length12 amino acids

Chemical FormulaC50H78N16O19S

DescriptionStandard

        GYRQSPDGACSV
    

Molecular Weight1239.32 Da

Isoelectric Point (pI)5.83

Net Charge (pH 7.0)-0.25

Net Charge (pH 7.4) -0.47

Charge Density (pH 7.0) -0.0208

GRAVY Index-0.69

Hydrophobic Moment 0.45

Boman Index-0.11

Instability Index100.54

Aliphatic Index 32.50

Aromaticity 0.0833

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 577.61

LogP -8.96

H-bond Donors 21.0

H-bond Acceptors 20.0

Rotatable Bonds 37.0

Heavy Atoms 86.0

Ring Count 2.0

Amide Bonds 12.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0049159 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5JHQ receptor chain A

MethodProtein-peptide complex structure