Peptide Database

Peptide NameHistone H2B-1

Function Ontology

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Standard StatusStandard

Sequence Length18 amino acids

Chemical FormulaC85H152N24O23

DescriptionStandard

        PDPAKTAPKKGLKKAVTK
    

Molecular Weight1878.26 Da

Isoelectric Point (pI)10.30

Net Charge (pH 7.0)4.95

Net Charge (pH 7.4) 4.89

Charge Density (pH 7.0) 0.2752

GRAVY Index-1.12

Hydrophobic Moment 0.51

Boman Index-0.29

Instability Index12.51

Aliphatic Index 54.44

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 760.33

LogP -7.52

H-bond Donors 26.0

H-bond Acceptors 28.0

Rotatable Bonds 64.0

Heavy Atoms 132.0

Ring Count 3.0

Amide Bonds 17.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0227198 VERIFIED: YES

Provenance & Taxonomy

OrganismIctalurus punctatus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)