Peptide Database

Peptide NameVIOLA_VIOOD

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length106 amino acids

Chemical FormulaC514H833N129O149S12

DescriptionStandard

        IPVMAKTIISNPVLEEGMLTYYTNKKLGDSAISCGETCFKFKCYTPRCSCMDAQKMKMVIGLVLVATTAFALMIPAASAVDDFITRRAYDNLVKSGAIKDSYPVCK
    

Molecular Weight11588.67 Da

Isoelectric Point (pI)8.77

Net Charge (pH 7.0)3.70

Net Charge (pH 7.4) 3.38

Charge Density (pH 7.0) 0.0349

GRAVY Index0.26

Hydrophobic Moment 0.69

Boman Index0.13

Instability Index39.73

Aliphatic Index 87.45

Aromaticity 0.0849

Extinction Coeff. Reduced 7450.00

Extinction Coeff. Oxidized 7825.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 4433.43

LogP -39.63

H-bond Donors 160.0

H-bond Acceptors 165.0

Rotatable Bonds 383.0

Heavy Atoms 804.0

Ring Count 14.0

Amide Bonds 109.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0363982 VERIFIED: YES

Provenance & Taxonomy

OrganismViola odorata [Plant]

FamilyCyclotide

Tax ID97441

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidedisulfide bond reported, sites not specified

Bio-Activity Profile

Function

Signaling