Peptide Database

Peptide NamePeptide chain C in PDB 2YBS

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC53H83N17O14

DescriptionStandard

        PATGGVKPHRY
    

Molecular Weight1182.33 Da

Isoelectric Point (pI)10.01

Net Charge (pH 7.0)2.04

Net Charge (pH 7.4) 1.93

Charge Density (pH 7.0) 0.1858

GRAVY Index-1.05

Hydrophobic Moment 0.34

Boman Index-0.12

Instability Index13.77

Aliphatic Index 35.45

Aromaticity 0.0909

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 488.60

LogP -5.20

H-bond Donors 18.0

H-bond Acceptors 17.0

Rotatable Bonds 34.0

Heavy Atoms 84.0

Ring Count 4.0

Amide Bonds 10.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0359957 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 2YBS receptor chain A

MethodProtein-peptide complex structure