Peptide Database

Peptide NameUncharacterized protein YgiM (DUF1202 family)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length1014 amino acids

Chemical FormulaC4604H7284N1260O1575S25

DescriptionStandard

        MIRQRVYFIGRKNPSLSGLAAGLYYKYYIIGVNELKSLKKRIAAGAVSLICAAGVMITPPPAVSVAAAATAQTTDYLNLREGAGVDKKVILTLSKGVTVTVLDSSNATWAKVQTSGGKQGYCSKQYLSISGAASNSGSSSSGTTAVTTASLNMREGAGTASKIIVTLPKGTSVKVIDSSNPSWLKVQTTDGKQGYCSKEFLNVSSSSGSGTTTNTGSANTGSTASSASALTTDYLNLREGAGTNYKVILTISKGTTVKVLDNSNAQWAKVETSSGKQGYCSKQYLKIGTSTGTNTNTNTPPSTGTGTTTTVTGVTNSSLNVRSGAGTTYGIVVTLAKGVTVTVTDNSNSVWAKIKTSDGKEGYCSKQYLNISTSTGTNTNTNTPPSTGTTGTATAVTTASLNVRSGAGTGYSVVVTLAKGVTVTVTDNSNASWAKIKTSDGKEGYCSKEFLNISTTQTGTDNNNGTDTNTNPGTDTGTGDNTGSDSHTVTGASVTADMLRLRESPDTSAKILANLPKGTSLTVLDTSNSAWTKVQTASGVAGYVSSEYIQLHYSDDVTNTTALSLSTTAQSIPVGKTLYIQASISPSGTYISWTSSNPNVATVSNGYVCAVSNGTAVITAKSGTYTATCNVTVTDAEPVKTAFASPNIASTGATVTLTAVTDTTRDGVQFVITMPDGSKKALNADSCTDESKQNTYTKKWTATTTFSAAGTYSFTAYSSLNGSMSSTGYTTNAYISNQQDFVTTSSEERRASDQMISLIAKWEGYSSTVYADQLTSNQVPTIGYGCTFGANAIFYNNMTETEAWSLLVNKINNSSYTTELNKMIQNNHFLMSQNQADCLISFAYNVGAGYFNSSAEMDFRRIMKNAVVPPALFSGETLSATVTKDTIVRDQPSISGNEVCSVLSGTSLNVTECNFANTKDGWYKVQLSSGSTGWVNSGYINLSNSDSLTHDLNYTNANAFGSDLIRWNQAGGKFYAGLFYRRLGEANVYNYGDYEAVKFNRYNYTYPNAAAGLS
    

Molecular Weight106288.21 Da

Isoelectric Point (pI)8.74

Net Charge (pH 7.0)10.73

Net Charge (pH 7.4) 9.90

Charge Density (pH 7.0) 0.0106

GRAVY Index-0.27

Hydrophobic Moment 0.64

Boman Index0.06

Instability Index16.87

Aliphatic Index 69.56

Aromaticity 0.0799

Extinction Coeff. Reduced 143020.00

Extinction Coeff. Oxidized 143770.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0230336 VERIFIED: NO

Provenance & Taxonomy

OrganismClostridium sp. KNHs216 [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal