Peptide Database

Peptide NameAntimicrobial peptide Nod1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length35 amino acids

Chemical FormulaC172H269N45O54S4

DescriptionStandard

        AMSTTDCFTYLEGPFFISDGSVVVDNCVRRRMLLD
    

Molecular Weight3959.50 Da

Isoelectric Point (pI)4.52

Net Charge (pH 7.0)-2.21

Net Charge (pH 7.4) -2.44

Charge Density (pH 7.0) -0.0633

GRAVY Index0.26

Hydrophobic Moment 0.48

Boman Index0.08

Instability Index53.23

Aliphatic Index 80.57

Aromaticity 0.1143

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1615.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1600.83

LogP -15.93

H-bond Donors 59.0

H-bond Acceptors 56.0

Rotatable Bonds 127.0

Heavy Atoms 275.0

Ring Count 5.0

Amide Bonds 35.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0353256 VERIFIED: NO

Provenance & Taxonomy

OrganismNordotis discus discus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial