Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length535 amino acids

Chemical FormulaC2519H3852N740O743S12

DescriptionStandard

        MAPRFMPLQAGTHVTSPFGPRDGGFHGGTDFGKTGGSAGLPVYACQSGTVIHAGAAQGYGGPDPAGWLVIDSDDEQGAGCVEYGHIIREVARGATVRAGQRIGRINPNRDTNGGVAPHLHLTVWAREYGGTRIDPVSWLRGSPHPGTPTTPPAPAPAPAPAPAPITPEVPNMPVGYGVTRTILAGTDGPRRADDYIGLHTQEGGRGDAIDLAEFCKRAGVSYNDAVDDVHTVRMVAPRNAPWAAVQANARGYHIVFAGSYVSWSRGRWLSRDASDGLDEDAMLTRGARCAAAASQELGIPAVWVGNNGATGWPQARGICGHKDFGARGGGHTDPYPNFPVDEFMRRVHAFLSPPSPNLIDAEAKVAARWIGKRITGANTPTRTDDETPLFRDGKKVGAFARFDNGHVYWRNGASAAYAIPGGGLFEAYAKRDWERGLGFPVLRHEVVTTPAGKTAGVQSFERGVLFTPVGGPVDGFVVHGEIGKRYAAMDWEQGPLGLPTSDEIRVDGSDLIEQRFEFGKLTYVPTGVLVELVTN
    

Molecular Weight56774.82 Da

Isoelectric Point (pI)6.47

Net Charge (pH 7.0)-3.08

Net Charge (pH 7.4) -4.28

Charge Density (pH 7.0) -0.0058

GRAVY Index-0.33

Hydrophobic Moment 0.83

Boman Index0.05

Instability Index37.48

Aliphatic Index 68.62

Aromaticity 0.0879

Extinction Coeff. Reduced 88350.00

Extinction Coeff. Oxidized 88600.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0233586 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage JKSyngboy [Virus]

Tax ID2762400

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Non-hemolytic Non-ribosomal