Peptide Database

Peptide NamePeptide chain B in PDB 5L04

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length37 amino acids

Chemical FormulaC184H284N52O54S2

DescriptionStandard

        AKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKE
    

Molecular Weight4152.67 Da

Isoelectric Point (pI)6.96

Net Charge (pH 7.0)-0.03

Net Charge (pH 7.4) -0.34

Charge Density (pH 7.0) -0.0008

GRAVY Index-0.59

Hydrophobic Moment 0.46

Boman Index-0.07

Instability Index73.20

Aliphatic Index 55.41

Aromaticity 0.0811

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1679.79

LogP -17.53

H-bond Donors 56.0

H-bond Acceptors 58.0

Rotatable Bonds 129.0

Heavy Atoms 292.0

Ring Count 10.0

Amide Bonds 39.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0120898 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5L04 receptor chain A

MethodProtein-peptide complex structure