Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC153H230N46O58S9

DescriptionStandard

        EQCGSQAGGALCPNCLCCSQFGWCGSTSDYCGSGCQSQC
    

Molecular Weight3930.32 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.25

Net Charge (pH 7.4) -2.56

Charge Density (pH 7.0) -0.0577

GRAVY Index-0.09

Hydrophobic Moment 0.30

Boman Index0.10

Instability Index46.32

Aliphatic Index 25.13

Aromaticity 0.0769

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1671.10

LogP -28.96

H-bond Donors 65.0

H-bond Acceptors 65.0

Rotatable Bonds 124.0

Heavy Atoms 266.0

Ring Count 5.0

Amide Bonds 44.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0051924 VERIFIED: YES

Provenance & Taxonomy

OrganismZea mays [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)