Peptide Database

Peptide NamePeptide chain C in PDB 5XCU

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC44H58N8O15

DescriptionStandard

        PYDVPDYA
    

Molecular Weight938.98 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.04

Net Charge (pH 7.4) -2.10

Charge Density (pH 7.0) -0.2551

GRAVY Index-0.85

Hydrophobic Moment 0.37

Boman Index0.08

Instability Index82.60

Aliphatic Index 48.75

Aromaticity 0.2500

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 359.30

LogP -1.76

H-bond Donors 12.0

H-bond Acceptors 13.0

Rotatable Bonds 23.0

Heavy Atoms 67.0

Ring Count 4.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0262404 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5XCU receptor chain A

MethodProtein-peptide complex structure