Peptide Database

Peptide NameSD2

Function Ontology

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Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC151H241N51O50S4

DescriptionStandard

        GPVTVEARTCESKSHRFKGPCVSTHNCANVCHNE
    

Molecular Weight3699.10 Da

Isoelectric Point (pI)7.91

Net Charge (pH 7.0)0.99

Net Charge (pH 7.4) 0.57

Charge Density (pH 7.0) 0.0292

GRAVY Index-0.67

Hydrophobic Moment 0.49

Boman Index-0.16

Instability Index29.86

Aliphatic Index 40.00

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1630.47

LogP -23.68

H-bond Donors 60.0

H-bond Acceptors 58.0

Rotatable Bonds 118.0

Heavy Atoms 256.0

Ring Count 6.0

Amide Bonds 36.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0138213 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis lyrata [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)