Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC162H247N49O62S8

DescriptionStandard

        QQCGSQAGGALCVNELCCSQYGYCGTTPDYCGQGCQSQCN
    

Molecular Weight4129.51 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.32

Net Charge (pH 7.4) -2.64

Charge Density (pH 7.0) -0.0580

GRAVY Index-0.38

Hydrophobic Moment 0.30

Boman Index0.03

Instability Index23.28

Aliphatic Index 31.75

Aromaticity 0.0750

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4970.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1813.68

LogP -30.01

H-bond Donors 67.0

H-bond Acceptors 68.0

Rotatable Bonds 132.0

Heavy Atoms 281.0

Ring Count 4.0

Amide Bonds 48.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0076370 VERIFIED: YES

Provenance & Taxonomy

OrganismSolanum pennellii [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)