Peptide Database

Peptide NameInternal virion protein D

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length1244 amino acids

Chemical FormulaC5911H9399N1717O1855S31

DescriptionStandard

        MTDAISIIKGFEGYIDHAKWDRTAYRAGYGSDTTTLADGTKVPITADTVVTREDSERDLASRAVEFENTAANQIGKDKWAALPGNVRAALTSTTYNYGSLPHDVVAATQTGDINAIASAVKGRGSDNGGINEDRRSKEAEIILGGPMSAADNAQYRPQVSTGVQYTAGTEVNLQSDTAQLDGAPRADAPEDTSLWQLQKDAFNQESTLAYLMNSNPYRDDPNFKAPSEEQRLQDLKDRGLDPEHYAKFTGQATSAEGYNRQLQNAVEDRDRLQRLQGAGMTGAALQIANQFLDPVSLATDVAVGAVAPQIVFGKRAGQVSRVLVGALSAGAGAGASTGINYAVNPNATKADLLMGVAFGIGVGGVAGKLMSRGATVTEGAQLQRLAQRVVDDHEGVKMGTGFGGAAPTGIHEPRLPFEAPISELDHADVAKTAFGSVRADLSSQLDKSPLVTTRALGGALVQDGTGKLGGAVNGKAASEEAAYFTEEFRSVYFRTYKAQLQKVFDKEGTGVVDKFWKGARERQFNDEVDRYVRDKQFMGGDKYSDEVKTVGKVIRDNLKELNQLQKNPWKREGLEGRSVFGHENIPDNPYYMPREWQSSKIAAAYHSYADGTLEDLFFGAFRSANADMEEGALRKLSTGFVKSLTDRSLGLDDNFVRTLSGDNIDEMVEMLSKHKGLSEEDAKEIAESFRKVPNGDAGRDKHQRRRSVLDEDYQLPYKPRTIHGVTEDQPLSIRDFFNTDATSVLDRYTRNAAGNIAMARIRVADPKTGKLVIDGLTSQKEIDNYIAMMRQEAVDRAVPKQQIAKDVKNVELAINAIKGHHIDGLEGTELGFWLRSIRKFNFSRIMNQAGFAAVPEIGNIVGSAGLKAALSQMPAVRRMINDAGELALKDGLADDIEYALGIGTERLTRYSPSDVYDDVMSVVDDGSRGWRDHVSNTLERANRVTADTSGMSFIDATTRRWASKAIIQNFANMAAKGKGISAKRLADLGLDEEMTKRVLAELKNPDFLPMKGQKVSGLRFDGARDKEAAEYFRRAIIRKTNQVIQKNDVGNLMPFMNTAVGKVIMQFRSFMAASYVKNSLKSLHMRDTEAAVGAAVTTGIAALTYSLQMQAQALGRSDRDKFLEKRLAPINVLKAAVARSGWSSIAPMLIDTVVPALGGDAQFSYARTTGQTSYSLFGNPTFGLFDDISTATKAAAGIARPGSLSQEEWRAFAKIVPFGNALPAIGLYNTLISDNPERMPRSAR
    

Molecular Weight135191.27 Da

Isoelectric Point (pI)6.40

Net Charge (pH 7.0)-4.01

Net Charge (pH 7.4) -5.31

Charge Density (pH 7.0) -0.0032

GRAVY Index-0.41

Hydrophobic Moment 0.83

Boman Index-0.04

Instability Index31.82

Aliphatic Index 77.58

Aromaticity 0.0732

Extinction Coeff. Reduced 111160.00

Extinction Coeff. Oxidized 111160.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0365915 VERIFIED: NO

Provenance & Taxonomy

OrganismAgrobacterium sp. ICMP 7243 [Bacterium]

Structure & Mods

Configlinear polypeptide/propeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal