Peptide Database

Peptide NamePeptide chain D in PDB 5II0

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length10 amino acids

Chemical FormulaC38H66N14O17

DescriptionStandard

        TPRTNTGSGT
    

Molecular Weight991.01 Da

Isoelectric Point (pI)9.41

Net Charge (pH 7.0)0.40

Net Charge (pH 7.4) 0.21

Charge Density (pH 7.0) 0.0398

GRAVY Index-1.40

Hydrophobic Moment 0.16

Boman Index-0.26

Instability Index-39.04

Aliphatic Index 0.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 522.57

LogP -10.82

H-bond Donors 19.0

H-bond Acceptors 18.0

Rotatable Bonds 29.0

Heavy Atoms 69.0

Ring Count 1.0

Amide Bonds 10.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0006923 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5II0 receptor chain A

MethodProtein-peptide complex structure