Peptide Database

Peptide NameCycloviolacin Y5

Function Ontology

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Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC124H199N31O38S6

DescriptionStandard

        GIPCGESCVWIPCLTSTVGCSCKSKVCY
    

Molecular Weight2924.48 Da

Isoelectric Point (pI)7.77

Net Charge (pH 7.0)0.70

Net Charge (pH 7.4) 0.40

Charge Density (pH 7.0) 0.0250

GRAVY Index0.64

Hydrophobic Moment 0.29

Boman Index0.25

Instability Index24.76

Aliphatic Index 72.86

Aromaticity 0.0714

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1078.18

LogP -12.39

H-bond Donors 44.0

H-bond Acceptors 45.0

Rotatable Bonds 89.0

Heavy Atoms 199.0

Ring Count 5.0

Amide Bonds 27.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0054802 VERIFIED: YES

Provenance & Taxonomy

OrganismViola biflora [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)