Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC167H247N47O60S8

DescriptionStandard

        QCGKEANGAICPNDLCCSFWGYCGSTEAYCSGPCQSQCGS
    

Molecular Weight4129.55 Da

Isoelectric Point (pI)4.14

Net Charge (pH 7.0)-2.32

Net Charge (pH 7.4) -2.64

Charge Density (pH 7.0) -0.0579

GRAVY Index-0.23

Hydrophobic Moment 0.38

Boman Index0.08

Instability Index14.92

Aliphatic Index 27.00

Aromaticity 0.1000

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1711.64

LogP -26.22

H-bond Donors 65.0

H-bond Acceptors 66.0

Rotatable Bonds 128.0

Heavy Atoms 282.0

Ring Count 7.0

Amide Bonds 44.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0167672 VERIFIED: YES

Provenance & Taxonomy

OrganismCrocus sativus [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)