Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length25 amino acids

Chemical FormulaC117H184N28O34S6

DescriptionStandard

        CGESCVYLPCFTTIIGCKCQGKVCY
    

Molecular Weight2719.27 Da

Isoelectric Point (pI)7.76

Net Charge (pH 7.0)0.70

Net Charge (pH 7.4) 0.40

Charge Density (pH 7.0) 0.0280

GRAVY Index0.66

Hydrophobic Moment 0.28

Boman Index0.24

Instability Index16.18

Aliphatic Index 70.00

Aromaticity 0.1200

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 986.51

LogP -9.26

H-bond Donors 40.0

H-bond Acceptors 41.0

Rotatable Bonds 85.0

Heavy Atoms 185.0

Ring Count 4.0

Amide Bonds 25.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0377612 VERIFIED: YES

Provenance & Taxonomy

OrganismMelicytus ramiflorus [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)