Peptide Database

Peptide NameGermin-like protein 3; fragment; rice (Oryza sativa)

Function Ontology

Annotation / Protein functional class ▸ Storage protein

Standard StatusStandard

Sequence Length181 amino acids

Chemical FormulaC890H1406N238O251S4

DescriptionStandard

        PVRVNGFVCKNPMNASADNFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF
    

Molecular Weight19584.39 Da

Isoelectric Point (pI)8.89

Net Charge (pH 7.0)2.31

Net Charge (pH 7.4) 2.00

Charge Density (pH 7.0) 0.0127

GRAVY Index0.09

Hydrophobic Moment 0.72

Boman Index0.15

Instability Index13.91

Aliphatic Index 100.17

Aromaticity 0.0773

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 7743.33

LogP -88.75

H-bond Donors 253.0

H-bond Acceptors 261.0

Rotatable Bonds 630.0

Heavy Atoms 1383.0

Ring Count 34.0

Amide Bonds 204.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0416259 VERIFIED: YES

Provenance & Taxonomy

OrganismOryza sativa [Plant]

Tax ID4530;0

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Storage Protein