Peptide Database

Peptide NameAbaecin

Function Ontology

—

Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC165H234N46O38S

DescriptionStandard

        FVPTMPTPGPRGRPFPTFPGQGPFNPRQHWP
    

Molecular Weight3501.97 Da

Isoelectric Point (pI)12.00

Net Charge (pH 7.0)2.85

Net Charge (pH 7.4) 2.59

Charge Density (pH 7.0) 0.0918

GRAVY Index-0.98

Hydrophobic Moment 0.46

Boman Index-0.01

Instability Index61.86

Aliphatic Index 9.35

Aromaticity 0.1613

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1268.55

LogP -11.06

H-bond Donors 39.0

H-bond Acceptors 43.0

Rotatable Bonds 90.0

Heavy Atoms 250.0

Ring Count 17.0

Amide Bonds 33.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0296367 VERIFIED: YES

Provenance & Taxonomy

OrganismEufriesea mexicana [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)