Peptide Database

Peptide NameARACIN1

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC193H317N59O60S2

DescriptionStandard

        GSCGAPIAKYDSQVLLTKRPPPCRRPRLENTEDVTYTTRP
    

Molecular Weight4488.07 Da

Isoelectric Point (pI)9.30

Net Charge (pH 7.0)2.74

Net Charge (pH 7.4) 2.50

Charge Density (pH 7.0) 0.0686

GRAVY Index-0.91

Hydrophobic Moment 0.34

Boman Index-0.26

Instability Index80.30

Aliphatic Index 58.50

Aromaticity 0.0500

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3105.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1924.47

LogP -22.82

H-bond Donors 69.0

H-bond Acceptors 65.0

Rotatable Bonds 139.0

Heavy Atoms 314.0

Ring Count 8.0

Amide Bonds 41.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0248325 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis lyrata [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)