Peptide Database

Peptide NameCyclotide mden-J

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC136H223N35O42S6

DescriptionStandard

        GSIPCGESCVYIPCISSIVGCACKSKVCYKN
    

Molecular Weight3212.82 Da

Isoelectric Point (pI)8.32

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0548

GRAVY Index0.57

Hydrophobic Moment 0.43

Boman Index0.21

Instability Index24.56

Aliphatic Index 81.61

Aromaticity 0.0645

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1218.80

LogP -14.41

H-bond Donors 48.0

H-bond Acceptors 50.0

Rotatable Bonds 102.0

Heavy Atoms 219.0

Ring Count 4.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0292975 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial