Peptide Database

Peptide NameType IV conjugative transfer system coupling protein TraD

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Standard StatusStandard

Sequence Length897 amino acids

Chemical FormulaC4505H7156N1280O1343S32

DescriptionStandard

        MSLNPRDLTQGGQVAFMRLKMFLQINNLISYYVIMGTVLFGIAVLLMRMSIQNLTNGIIYWFVRVMSPFTEKMVSQPVYTIRYYEHNLQYSARQVLSDSYTMYCGQLLKQELVIAGCAALLIAFLATLAVYWYLGRAGRKQSEDEIIGGRVLCESPKEVARMMKKREEASDIRIDDLPLKLDSEIQNMARHGTVSTGKSTLMRKILKQLRDRGDLVIIYDKGCTFAEDFYDESRDKVLNALDSRCPNWDLWEECRSIAELENASTTLIPAISGEDPFWQGSARTIFAEGAERMRKDEDRSYNKFLRTLLAIKLDQLRAFLAGTPASTLVDGKIEKTAISIRSVLTNYVKALRYLQGIDRPGREKFTIREWMKGQTDKSKNGWLFITSDEQNHESLKPLISLWLSIAATSLLAMGPNRQRRVWFFYDELASLHKLSSLPRIISEARKFGGCFVLGFQNIAQMEEIYGPKAAAGLFDLLNTKFFFRSPSAEIAQFVEKDLGETRRKKFNEQTSFGHEQVRDGISFGKEEERVTVVTYSDVQKLNDLQCYVTLPGDYPVVKLSMSYEAMPKVADALLLRDVQTSLDQTLEDEIRRRGEEERHKFAGLFEGESLIQAVPGGAFIPEGNLSNATHPVEVAERNYRLASDELNRANVDVAGKQERQIQAAQAVAARKGELDAANKTFADAKEEIKKFERFAHDPMAGGHRMWQMAGLKAQRAQNEVNQKQAEFNAAEKEKADADAALNVALESRKQKEQKAKDASDKLDKENKRNHPGKATGKGQPVGDKWLEDAGKEAGAPVPDRIADKLRDKEFKNFDDFRKKFWEEVSKDPELSKQFIKGNRDRMQVGKAPKSRKSDAAGKRTSFELHHDKPISQDGGVYDMDNIRVTTPKHHIDIHRGK
    

Molecular Weight101762.86 Da

Isoelectric Point (pI)8.75

Net Charge (pH 7.0)9.89

Net Charge (pH 7.4) 8.50

Charge Density (pH 7.0) 0.0110

GRAVY Index-0.53

Hydrophobic Moment 0.88

Boman Index-0.10

Instability Index40.18

Aliphatic Index 79.99

Aromaticity 0.0847

Extinction Coeff. Reduced 101760.00

Extinction Coeff. Oxidized 102260.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0085877 VERIFIED: NO

Provenance & Taxonomy

OrganismSalmonella enterica [Bacterium]

FamilyColicin/Pyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase