Peptide Database

Peptide NameColicin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length663 amino acids

Chemical FormulaC3193H5010N894O1001S6

DescriptionStandard

        MNRGIPRTPSSPDGFGFNARRVSGPDHSDRAYDAVDYALDWLDESNTATEELFNENIRNITHITNTELAKTRAAVAAVVPSGTDALEIELRTLKLQLFKARTDHKEHIAIANLYYGHDPLTHKVQDARYKGFELTGRRGGQRAYYNAIAKWNVSYAAAYEAKFLAEQIKLLDARLTTHNKAIAQANAKAAAEARAKAQAEAKRAAQEQARKAAEAEAKRTAEEQARIARIAATVAAKQAHDAAMALWEAERWADADELEAEEARRQAEVQKARQPARATRTFPVSSSAVVAGPVFTIAGGSLAPNPVTASGITAALRVAVSAIIETVAATALPAVAGFAALVYPSELGNGERYALSVPLSEFVPANTDDLLAVAISKGKINLPVVLGSMTTDDEMAFVVAGADGTSVPSSVPIRLATLDPHSNVYKSSSPDGSSIWMTWTPIIKGTDASTTLPSSVPNILLYEGGSPWATTRWVEKDPELEDYDFGSGFVTVFPVESGIPPIYTVFNSPYEGATTKGEHSGRDFNPEQAGGPILGLDWSTATVTQEGLDAVKLHTGRLNQSDANDVMIERLEKILSGNLDITNTDRRYYTHEIRELERFRALGLADDFSPEPGSPYWNNAHTATLEDYKLQDRELLLYTPDALIKSVLQDERDYQKFLKEISQ
    

Molecular Weight72129.72 Da

Isoelectric Point (pI)5.25

Net Charge (pH 7.0)-19.24

Net Charge (pH 7.4) -20.30

Charge Density (pH 7.0) -0.0290

GRAVY Index-0.34

Hydrophobic Moment 0.79

Boman Index-0.00

Instability Index43.61

Aliphatic Index 82.58

Aromaticity 0.0769

Extinction Coeff. Reduced 87780.00

Extinction Coeff. Oxidized 87780.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0038377 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas ogarae [Bacterium]

FamilyPyocin/Colicin

Tax ID1114970

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal