Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length372 amino acids

Chemical FormulaC1828H2843N507O540S10

DescriptionStandard

        MEWNDSEDDWFSNVEPPQMGFSWAAWNKPAEKAPVLPKKEKWPTPKPRTDLIFAKSGTPGNWRETHAGTAIEPATNFGAVMIAGAMLMPSAETAIATALGVHLGLGRMAGGGIMQKGLSWGIRGAKGPAGAFVLGMLPTRLADDTHYTDDQLRRLSHASTRVRFQFRLDPEGELRVYGIHTTAKGDDSVRTVQAVWNERKTVLEAKLNDISIIWTPREGPLGLPPLTYPEKSDELATILVHPIPENTDSQIDGLPGDDITIEDCIVVFPAGSGLKSLYLVFARPVGGDHSYYPAPKALTAFPDALPTRKMSSVKGGGKKRSRWKDPKGRIYEWDYENGRVELYDKQGKHLGEFDPNSGERTKDAEPGRTTPK
    

Molecular Weight40882.85 Da

Isoelectric Point (pI)6.73

Net Charge (pH 7.0)-0.75

Net Charge (pH 7.4) -1.50

Charge Density (pH 7.0) -0.0020

GRAVY Index-0.54

Hydrophobic Moment 0.74

Boman Index-0.02

Instability Index35.46

Aliphatic Index 70.86

Aromaticity 0.0833

Extinction Coeff. Reduced 73910.00

Extinction Coeff. Oxidized 73910.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0190531 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. v388 [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal