Peptide Database

Peptide NamePathogenesis-related thaumatin-like protein (Fragment)

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length179 amino acids

Chemical FormulaC823H1243N245O264S15

DescriptionStandard

        NNCPYTVWAAAVPGGGRRLDRGQTWTINVAAGTAGARIWARTNCNFDGNGRGSCQTGDCGGVLQCTAYGRPPNTLAEYALNQFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGIRCTADINGQCPNQLRAPGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKTRCPDAYSYPQDDPIT
    

Molecular Weight19274.13 Da

Isoelectric Point (pI)6.30

Net Charge (pH 7.0)-0.37

Net Charge (pH 7.4) -0.80

Charge Density (pH 7.0) -0.0021

GRAVY Index-0.48

Hydrophobic Moment 0.73

Boman Index-0.03

Instability Index25.68

Aliphatic Index 47.49

Aromaticity 0.1061

Extinction Coeff. Reduced 26930.00

Extinction Coeff. Oxidized 27805.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8197.64

LogP -110.74

H-bond Donors 292.0

H-bond Acceptors 279.0

Rotatable Bonds 599.0

Heavy Atoms 1347.0

Ring Count 35.0

Amide Bonds 203.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0153386 VERIFIED: NO

Provenance & Taxonomy

OrganismCoffea arabica [Plant]

FamilyThaumatin

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial