Peptide Database

Peptide NameAntimicrobial peptide GAPDH1

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC148H258N48O41

DescriptionStandard

        VKVGINGFGRIGRLVTRAAAQNKKVTVVAIND
    

Molecular Weight3365.93 Da

Isoelectric Point (pI)11.73

Net Charge (pH 7.0)4.74

Net Charge (pH 7.4) 4.52

Charge Density (pH 7.0) 0.1480

GRAVY Index0.21

Hydrophobic Moment 0.92

Boman Index0.03

Instability Index-4.43

Aliphatic Index 115.62

Aromaticity 0.0312

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1479.30

LogP -16.30

H-bond Donors 52.0

H-bond Acceptors 46.0

Rotatable Bonds 116.0

Heavy Atoms 237.0

Ring Count 1.0

Amide Bonds 35.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0058489 VERIFIED: NO

Provenance & Taxonomy

OrganismPeriophthalmus magnuspinnatus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial