Peptide Database

Peptide NamePeptide chain Y in PDB 3D9L

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC43H58N8O14

DescriptionStandard

        YPTSPSYP
    

Molecular Weight910.97 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.45

Charge Density (pH 7.0) -0.0302

GRAVY Index-1.21

Hydrophobic Moment 0.05

Boman Index0.06

Instability Index118.60

Aliphatic Index 0.00

Aromaticity 0.2500

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 341.80

LogP -3.43

H-bond Donors 11.0

H-bond Acceptors 14.0

Rotatable Bonds 19.0

Heavy Atoms 65.0

Ring Count 5.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0220389 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3D9L receptor chain A

MethodProtein-peptide complex structure