Peptide Database

Peptide NameType VI secretion system tube protein Hcp

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length591 amino acids

Chemical FormulaC2993H4554N814O878S16

DescriptionStandard

        MSDLVYLRITGERQGNISSGCGTYESVGNRWQVGHEDEIFVFSLVDTLTSTGNGLNLQGLNFCKLIDKSSPLFCNAITQNERLYIEIDLYRINKTGRWERYYYIQLRNASVADIRTSFTHNNLDTESITVTYEYIVCKHLIANTEFYYLAFPAEYNAMFIPRRVAPAHKPTPAPVPIVNPVPPPPEVTPVYAKSCLQEKGCTDAGTTEEPAENFGQMAIFAQPAVDDCCGYRHQHDEKNMAHPAEAVAAPLVFANQIWGKWSLSGVLSATRGVPYIGALASALYIPSAGEGSARVPGRDEFWYEEVLRQKALAGSTATTRVRFFWRDDIHGKPQVYGVHTGEGTPYENVRVANMQWNKHRQRYEFTPAHSADGPLITWTPEKPATGDLPGHTGNSRPPVDQPTILVTPIPDGKNEYTTPPFSLPAVEDFNDYILIFPADSGIKPIYVYLKDDPRNQPGVVTGKGVELSPGTRWLDMSVTNKGNGAPIPAHIADKLRGREFKNFDDFREALWLEVSKDPDLMEQFLEKNRDALNQAHAPYTSKDGYYYGPKKVLKKFQIHHFIAIEHGGEVYDIDNMRIVTPRLHDEIHYRR
    

Molecular Weight66500.14 Da

Isoelectric Point (pI)5.97

Net Charge (pH 7.0)-9.84

Net Charge (pH 7.4) -11.30

Charge Density (pH 7.0) -0.0166

GRAVY Index-0.46

Hydrophobic Moment 0.56

Boman Index0.00

Instability Index35.45

Aliphatic Index 75.09

Aromaticity 0.1083

Extinction Coeff. Reduced 99700.00

Extinction Coeff. Oxidized 100200.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0364158 VERIFIED: YES

Provenance & Taxonomy

OrganismSalmonella enterica [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear polypeptide/propeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal

TargetEscherichia coli