Peptide Database

Peptide NamePeptide chain D in PDB 4PSI

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length10 amino acids

Chemical FormulaC54H74N10O20

DescriptionStandard

        ALDDDEFVPY
    

Molecular Weight1183.22 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-4.20

Net Charge (pH 7.4) -4.39

Charge Density (pH 7.0) -0.4199

GRAVY Index-0.43

Hydrophobic Moment 0.09

Boman Index0.09

Instability Index28.26

Aliphatic Index 78.00

Aromaticity 0.2000

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 485.86

LogP -2.53

H-bond Donors 15.0

H-bond Acceptors 16.0

Rotatable Bonds 34.0

Heavy Atoms 84.0

Ring Count 3.0

Amide Bonds 9.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0332316 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4PSI receptor chain A

MethodProtein-peptide complex structure