Peptide Database

Peptide NameSmd2

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC163H266N52O49S6

DescriptionStandard

        TCDFLSGLGVNHSACAAHCYAKLKGGGACNSKGVCVCRK
    

Molecular Weight3930.56 Da

Isoelectric Point (pI)8.90

Net Charge (pH 7.0)3.51

Net Charge (pH 7.4) 3.12

Charge Density (pH 7.0) 0.0900

GRAVY Index0.18

Hydrophobic Moment 0.34

Boman Index0.08

Instability Index32.69

Aliphatic Index 65.13

Aromaticity 0.0513

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1617.09

LogP -22.12

H-bond Donors 63.0

H-bond Acceptors 61.0

Rotatable Bonds 130.0

Heavy Atoms 270.0

Ring Count 4.0

Amide Bonds 40.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0182268 VERIFIED: YES

Provenance & Taxonomy

OrganismMyrmica ruginodis [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)